Protein Overview: IF3_STRAW

General Information:
Name(s) found:	IF3_STRAW [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|29833279\|ref\|NP_827913.1\| translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] [NCBI NR] gi\|29610401\|dbj\|BAC74448.1\| putative translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] [NCBI NR] Translation initiation factor IF-3 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=infC PE=3 SV=1 [Swiss-Prot] putative translation initiation factor IF-3 [Streptomyces avermitilis MA-4680]gi\|29610401\|dbj\|BAC74448.1\| putative translation initiation factor IF-3 [Streptomyces avermitilis MA-4680]gi\|39931256\|sp\|Q828D2\|IF3_STRAW Translation initiation factor IF-3 [nrdb_11152004_Chlamydomonas] translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] [nr-271106-contam.fasta] putative translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] [nr-271106-contam.fasta]
Organism:	Streptomyces avermitilis MA-4680
Length:	241 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWCYRGGSIS TEPRINDRIR VPEVRLVGPS GEQVGIVPLA KALELAQEYD LDLVEVAASA  60
   61 RPPVCKLMDY GKFKYESAMK AREARKNQAH TVIKEMKLRP KIDPHDYDTK KGHVVRFLKQ 120
  121 GDKVKITIMF RGREQSRPEL GYRLLQRLAT DVEDLGFVES SPKQDGRNMI MVLGPHKKKT 180
  181 EAMAEAREAQ AARKAEAKAN PGRSQNAADE DIPEGELPEG EVPEAETTEA AEAPAEASTE 240
  241 A

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
translation initiation factor activity	5.47485713101079	bayes_pls_golite062009
translation regulator activity	1.62528736558737	bayes_pls_golite062009
translation factor activity, nucleic acid binding	1.60662288414996	bayes_pls_golite062009
binding	1.47561914415547	bayes_pls_golite062009
nucleic acid binding	1.12320467511263	bayes_pls_golite062009

Term	Confidence	Notes
translation initiation factor activity	8.09269133854598	bayes_pls_golite062009
translation regulator activity	4.19718241948497	bayes_pls_golite062009
translation factor activity, nucleic acid binding	4.18160226822061	bayes_pls_golite062009
nucleic acid binding	3.21583663075334	bayes_pls_golite062009
binding	2.86350131209009	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..81]	PSI-BLAST	24.69897	TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN
2	View Details	[82..241]	PSI-BLAST	31.69897	TRANSLATION INITIATION FACTOR 3 C-TERMINAL DOMAIN

Protein Overview: IF3_STRAW

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: