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Protein Overview: gi|25343478

General Information:
Name(s) found: gi|25343478 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||H97461 hypothetical protein AGR_C_1538 [imported] - Agrobacterium tumefaciens (strain C58, Cereon) [NCBI NR]
    • Organism: Agrobacterium tumefaciens
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAIPHAGAL NLTKHGYNPI AYRAIKIGGN IVKVIFSIDL FLRPGTRKTL PAHQPARRRP  60
   61 KSEKAIPRII WQTNYSNRVT TPIYANFLFN RWLTPEFEYR YHDDEACQAY IDRHFPGRYA 120
  121 DAFRRLQVGA AKADFWRILV LLQDGGIYLD IDSNFAARPE DAIGPDEEAV FIAMKDGEVT 180
  181 NYFMASRPGH PALKLIADRI AQNIEEGTLV SVYDMTGPTV VHAVVKELGL PERNYREMCT 240
  241 QGQFTNKRAQ YADKKDGAWW AEQAKTSILK S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] FFAS03 2.27 Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.973365540409509 bayes_pls_golite062009
  • transferase activity
    		•  0.677420913179584 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle