Protein Overview: ABCF1_RAT

General Information:
Name(s) found:	ABCF1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|56404328\|sp\|Q6MG08.1\|ABCF1_RAT RecName: Full=ATP-binding cassette sub-family F member 1; AltName: Full=ATP-binding cassette 50 [NCBI NR] gi\|46237664\|emb\|CAE84039.1\| ATP-binding cassette, sub-family F (GCN20), member 1 [Rattus norvegicus] [NCBI NR] gi\|158081775\|ref\|NP_001103353.1\| ATP-binding cassette, sub-family F (GCN20), member 1 [Rattus norvegicus] [NCBI NR] gi\|127801541\|gb\|AAI00257.1\| Abcf1 protein [Rattus norvegicus] [NCBI NR] gi\|109509674\|ref\|XP_001056151.1\| PREDICTED: similar to ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50) [Rattus norvegicus] [NCBI NR] ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus GN=Abcf1 PE=1 SV=1 [Swiss-Prot] ATP-binding cassette, sub-family F (GCN20), member 1 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 ATP-binding cassette sub-family F member 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 ATP-binding cassette, sub-family F, member 1 [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Abcf1 protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 ATP-BINDING CASSETTE, SUB-FAMILY F (GCN20), MEMBER 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] PREDICTED: similar to ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50) [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Abcf1 ATP-binding cassette sub-family F member 1 [rat-ipi-250309-contam.fasta] ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus GN=Abcf1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	839 amino acids
Gene Ontology:
Cellular Component:	ribosome [IDA]
Biological Process:	translation [NAS]
Molecular Function:	nucleotide binding [IEA] ATPase activity [IEA] ATP binding [IEA] ribosomal small subunit binding [IPI] ribosomal large subunit binding [IPI]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKGPKQQPP EPEWIGDGEG TSPADKVVKK GKKDKKTKKT FFEELAVEDK QAGEEEKLQK  60
   61 EKEQQQQQQQ QKKKRDTRKG RRKKDVDDDD DGDERVLMER LKQLSVPASD EEDEVPVPVP 120
  121 RGRKKAKGGN VFEALIQDES EEEKEEEEEK PVLKPAKPEK NRINKAVAEE PPGLRNKKGK 180
  181 EEKSKGKAKN KPSATDSEGE DDEDMTKEKE PPRPGKDKDK KGAEQGSEEE KEEKEGEVKA 240
  241 NDPYAHLSKK EKKKLKKQMD YERQVESLKA ANAAENDFSV SQAEVSSRQA MLENASDIKL 300
  301 EKFSISAHGK ELFVNADLYI VAGRRYGLVG PNGKGKTTLL KHIANRALSI PPNIDVLLCE 360
  361 QEVVADETPA VQAVLRADTK RLRLLEEEKR LQGQLEQGDD TAAEKLEKVY EELRATGAAA 420
  421 AEAKARRILA GLGFDPEMQN RPTQKFSGGW RMRVSLARAL FMEPTLLMLD EPTNHLDLNA 480
  481 VIWLNNYLQG WRKTLLIVSH DQGFLDDVCT DIIHLDTQRL HYYRGNYMTF KKMYQQKQKE 540
  541 LLKQYEKQEK KLKELKAGGK STKQAEKQTK EVLTRKQQKC RRKNQDEESQ DPPELLKRPR 600
  601 EYTVRFTFPD PPPLSPPVLG LHGVTFGYEG QKPLFKNLDF GIDMDSRICI VGPNGVGKST 660
  661 LLLLLTGKLT PTNGEMRKNH RLKIGFFNQQ YAEQLHMEET PTEYLQRGFN LPYQDARKCL 720
  721 GRFGLESHAH TIQICKLSGG QKARVVFAEL ACREPDVLIL DEPTNNLDIE SIDALGEAIN 780
  781 EYKGAVIVVS HDARLITETN CQLWVVEEQS VSQIDGDFDD YKREVLEALG EVMVNRPRD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: ABCF1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: