Protein Overview: gi|55250448

General Information:
Name(s) found:	gi\|55250448 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|55250448\|gb\|AAH85900.1\| Smpd4 protein [Rattus norvegicus] [NCBI NR] Unknown (protein for MGC:94731) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 RGD1310674 protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 Hypothetical protein RGD1310674_predicted [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] Tax_Id=10116 RGD1310674_predicted protein [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Smpd4 protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] RGD1310674 protein [Rattus norvegicus] [nr-271106-contam.fasta] Smpd4 protein OS=Rattus norvegicus GN=Smpd4 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	493 amino acids
Gene Ontology:
Cellular Component:	trans-Golgi network [UNKNOWN] endoplasmic reticulum [UNKNOWN] Golgi apparatus [UNKNOWN]
Biological Process:	sphingomyelin catabolic process [UNKNOWN]
Molecular Function:	protein binding [UNKNOWN] sphingomyelin phosphodiesterase D activity [UNKNOWN]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFPHLQQPS FLLASLKADS INKPFAQRCQ DLVKVIEDFP AKELHAIFPW LVESIFGSLD  60
   61 GVLVGWNLRC LQGRVNPVEY SIAMEFLDPS GPMMKLVYKL QAEDYNFDFP VSCLPGPVKA 120
  121 SIQENVLPDS PLYHNKVQFP PTGGLGLNLA LNPFEYYMFY FALSLISQKP MPMSFHVRTS 180
  181 DCAYFILVDR YLSWFLPTEG SVPPPLCSSP GGSSPSPAPR TPAMPFASYG LHTSLLKRHI 240
  241 SHQTSVNADP ASHEIWRSET LLQVFVEMWL HHYSLEMYQK MQSPHAKLEV LHYRLNVSSA 300
  301 LHSPAQPSLQ ALHAYQESFM PTEEHVLVVR LLLKHLHAFA NSLKPDQASP SAHSHATSPL 360
  361 EEFKRAAVPR FVQQKLYVFL QHCFGHWPLD ASFRAVLEMW LSYLQPWRYA PEKQAQGSDS 420
  421 QPRCVSERWA PFIQENLLMY TKLFVSFLNR ALRTDLVSPK NALMVFRVAK VFAQPNLTEM 480
  481 IQKAGDGGRE EAF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.75

Protein Overview: gi|55250448

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: