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Protein Overview: gi|52214354, gi|...

General Information:
Name(s) found: gi|53711489 [NCBI NR]
gi|52214354 [NCBI NR]
Description(s) found:
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  • gi|53711489|ref|YP_097481.1| haloacid dehalogenase-like hydrolase [Bacteroides fragilis YCH46] [NCBI NR]
  • gi|52214354|dbj|BAD46947.1| haloacid dehalogenase-like hydrolase [Bacteroides fragilis YCH46] [NCBI NR]
  • haloacid dehalogenase-like hydrolase [Bacteroides fragilis YCH46]gi|52214354|dbj|BAD46947.1| haloacid dehalogenase-like hydrolase [Bacteroides fragilis YCH46] [nrdb_11152004_Chlamydomonas]
  • haloacid dehalogenase-like hydrolase [Bacteroides fragilis YCH46] [nr-271106-contam.fasta]
    • Organism: Bacteroides fragilis YCH46
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYKLLVLDL DGTLTNAKKE ITLRNREALI HAQEQGVKLI LASGRPTFGI APLADELRMK  60
   61 EFGGFILSYN GGEIIDWSTG EIVYANVLPD KVIPRLYECA TRNQLPILTY DHQYIITEYP 120
  121 DDDYVRKEAF LNKMQIYPST DFLKDIRLPL PKCLIVGEPH RLIPIEAELS VELQGQLSVY 180
  181 RSEPFFLELV PQGIDKAQSL SVLLNKLNMN REEIVAVGDG YNDLSMIQFA GLGVAMGNAQ 240
  241 EPVKKAADYI TLSNEEDGVA AVVNKFFTKA PEKGETTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 43.221849 Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • hydrolase activity
    		•  0.996930438913923 bayes_pls_golite062009
  • phosphatase activity
    		•  0.0985887286442809 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.0342238658800214 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle