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Protein Overview: gi|52425982, gi|...

General Information:
Name(s) found: gi|52425982 [NCBI NR]
gi|52308034 [NCBI NR]
Description(s) found:
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  • gi|52425982|ref|YP_089119.1| UppS protein [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
  • gi|52308034|gb|AAU38534.1| UppS protein [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
  • UppS protein [Mannheimia succiniciproducens MBEL55E]gi|52308034|gb|AAU38534.1| UppS protein [Mannheimia succiniciproducens MBEL55E] [nrdb_11152004_Chlamydomonas]
  • UppS protein [Mannheimia succiniciproducens MBEL55E] [nr-271106-contam.fasta]
    • Organism: Mannheimia succiniciproducens MBEL55E
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKELDLNNIP KHIAIIMDGN GRWAKQQGKM RIFGHKSGVR AVRRSVSYAC QIGVQALTLY  60
   61 AFSSENWNRP EQEVNALMTL FMQALDLEVK KLHKNNIKLK VLGDISGFSP KLQEKIARAE 120
  121 TLTANNDSLT LNIAANYGGC WDIVQATRQI AQQVKDGSLT ISEITEELFQ RNLVTKEQPP 180
  181 VDLLIRTSGE QRISNFLLWQ IAYAELYFSH VLWPDFNEQE FNRAIYVYQQ RERRFGTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 92.154902 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.331797220769091 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle