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Protein Overview: gi|52306596, gi|...

General Information:
Name(s) found: gi|52424544 [NCBI NR]
gi|52306596 [NCBI NR]
Description(s) found:
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  • gi|52424544|ref|YP_087681.1| hypothetical protein MS0489 [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
  • gi|52306596|gb|AAU37096.1| unknown [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
  • hypothetical protein MS0489 [Mannheimia succiniciproducens MBEL55E]gi|52306596|gb|AAU37096.1| unknown [Mannheimia succiniciproducens MBEL55E] [nrdb_11152004_Chlamydomonas]
  • hypothetical protein MS0489 [Mannheimia succiniciproducens MBEL55E] [nr-271106-contam.fasta]
  • unknown [Mannheimia succiniciproducens MBEL55E] [nr-271106-contam.fasta]
    • Organism: Mannheimia succiniciproducens MBEL55E
    Length: 263 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPIKYKPL IFLSNGVLRL LGNIIKILSY PFHAIFPKKR FTIPEFSPAF RPSNKQSKIN  60
   61 KTIWQTNYSN KVTLPVYCNY LVNRALSWSY EYRYVSTEAR EEYIKANADT RVYEAYSKLT 120
  121 DGAAQADFWR IFTLYNEGGV YMDIDGHLVW CLADIIDEND TEVVITRRDK YTNFFLASAK 180
  181 GNRFLKDTLD IIVNNIEQRK IDGGVFTLTG PTTLNMALKG KNVNSRRDKF TCAQGTFTNE 240
  241 YFQYMDKKKG KWNHTKNEDL LKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] FFAS03 1.83 Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.973365540409509 bayes_pls_golite062009
  • transferase activity
    		•  0.677420913179584 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle