YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|34365737, gi|...

General Information:
Name(s) found: gi|34365737 [NCBI NR]
gi|30685521 [NCBI NR]
gi|25082966 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|34365737|gb|AAQ65180.1| At4g21660 [Arabidopsis thaliana] [NCBI NR]
  • gi|30685521|ref|NP_193897.2| proline-rich spliceosome-associated (PSP) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|25082966|gb|AAN72024.1| spliceosome associated protein - like [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 584 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chloroplast [IEA]
    Biological Process: mRNA processing [IEA][ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTADSTVALV HSVVSNGDVS NGNTSASSKK SREIDRRRRR RKQKKNNKAS QADVDASDVS  60
   61 AASESKENTD PQPQVCEQIV IEYVPEQAEF EDGFNDEFKE IFEKFNFREP LASEEDGTKD 120
  121 ESEEKEDVKK KVNSDSDSDD DEQDNQNKEK GISNKKKKLQ RRMKIAELKQ VSARPDVVEV 180
  181 WDATSADPKL LVFLKSYRNT VPVPRHWSQK RKYLQGKRGI EKQPFHLPDF IAATGIEKIR 240
  241 QAYIEKEDGK KLKQKQRERM QPKMGKMDID YQVLHDAFFK YQTKPKLSAL GDLYFEGKEF 300
  301 EVKLRETKPG FLSNDLKEAL GMPEGAPPPW LINMQRYGPP PSYPHLKIPG LNAPIPIGAS 360
  361 FGFHAGGWGK PPVDEYGRPL YGDVFGVQQQ DQPNYEEEPI DKSKHWGDLE EEEEEEEEEE 420
  421 EEQEEEMDEE ELEDGTESVD TLSSTPTGIE TPDAIELRKD QRKEPDRALY QVLEEKGESV 480
  481 APGTLLGTSH TYVIKTGTQE KTGAKRVDLL RGQKTDRVDV SLQPEELDAM ENVLPAKYEE 540
  541 AREEEKLRNK PVDLSDMVVE HVQQNSRKRK MHDKEGKKKK DFKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 3.39794 Heavy meromyosin subfragment
    2 View Details [186..357] Pfam 70.275724 No description for PF04037.4 was found. No confident structure predictions are available.
    3 View Details [358..430] deduced N/A No confident structure predictions are available.
    4 View Details [431..584] MSA 4.038982 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle