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Protein Overview: JMJ14_ARATH

General Information:
Name(s) found: JMJ14_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 954 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: photoperiodism, flowering [IMP]
    histone H3-K4 demethylation [IMP]
    regulation of transcription [TAS]
    negative regulation of flower development [IMP]
    Molecular Function: transcription factor activity [ISS]
    histone demethylase activity (H3-K4 specific) [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQLASLAES VAMEEDSEKQ SIKGESSLEP DSTPSSPKIT ARWNPSEACR PLVDDAPIFY  60
   61 PTNEDFDDPL GYIEKLRSKA ESYGICRIVP PVAWRPPCPL KEKKIWENSK FPTRIQFIDL 120
  121 LQNREPIKKS TKTKKRKRRR ISKIGYTRRK RDSGCDTASS GSSDSEGKFG FQTGPDFTLE 180
  181 EFQKYDEYFK ECYFQSEDHP GSKASENKKF KPKVKDLEGE YWRIVEQATD EVEVYYGADL 240
  241 ETKKFGSGFP KYKPGYPISE ADQYSQCGWN LNNLSRLPGS VLAFESCDIS GVIVPWLYVG 300
  301 MCFSTFCWHV EDHHLYSMNY LHTGDPKVWY GIPGNHAESF ENVMKKRLPD LFEEQPDLLH 360
  361 QLVTQLSPRI LKEEGVPVYR AVQRSGEFIL TFPKAYHSGF NCGFNCAEAV NVAPVDWLVH 420
  421 GQNAVEGYSK QRRKSSLSHD KLLLGAAMEA TYCLWELSLS KKKTPVIARW KRVCSEDGLL 480
  481 TKAVKKRVQM EEERLNHLQD GFSLRKMEGD FDNKRERECF LCFYDLHMSA SSCKCSPNRF 540
  541 ACLIHAKDLC SCESKDRYIL IRHTLDELWA LVRALEGDLD AIDLWASKCR DQYPSQHPRA 600
  601 REYAYLKSAP CIKSRGSSKV QQREQNNLQL VSERLQSDLT SNKEVQLKQD GDSDVNRHGH 660
  661 ESERNHVHGI TDKSAVTDVK LGVGGKFDEK KISVESQNPH SVSDVGCSEL AKKVDGCLGG 720
  721 KDQNAATNRL SLSVELLSSG SLVVKKLWCS KQAIYPKGFK SRVKFLSVLD PTNLTNYISE 780
  781 VLDAGLLGPL FRVSVEDYPT ENFSNVSAEK CWQMVTQRLK LEIIKKCDQP VSSLTSLQPL 840
  841 ESINGLEMFG FLSPHVIKVV EALDPKHQLE EYWNQKAVKL FGAEPIKEGE KDDTEKGGAS 900
  901 DPSLDRDTRL LRGLLKKATP EELVMMHGLL CGETRNTELK EELSTLVDKM EISP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..447] PSI-BLAST 74.39794 No description for 2oq6A was found.
    2 View Details [448..579] PSI-BLAST 34.0 No description for 2yu1A was found.
    3 View Details [580..723] deduced N/A No confident structure predictions are available.
    4 View Details [724..782] Pfam 13.39794 No description for PF05964.6 was found. No confident structure predictions are available.
    5 View Details [783..954] Pfam 28.585027 No description for PF05965.6 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle