YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: XPOT_ARATH

General Information:
Name(s) found: XPOT_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • Exportin-T OS=Arabidopsis thaliana GN=PSD PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 988 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: flower development [IMP]
    tRNA export from nucleus [IGI][ISS]
    meristem initiation [IMP]
    Molecular Function: tRNA binding [ISS]
    nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDLEQAIVI SFETGAVDSA LKSQAVTYCQ QIKETPSICS ICIEKLWFSK LVQVQFWCLQ  60
   61 TLQDVLRVKY GSMSLDEQSY VRKSVFSMAC LEVIDNENAG RVVEGPPFVK NKLAQVLATL 120
  121 IYYEYPLIWS SVFLDFMLHL CKGAVVIDMF CRVLNALDDE LISLDYPRTP EEISVAARVK 180
  181 DAMRQQCVPQ IARAWYDIVS MYKNSDPDLS ATVLDCMRRF VSWIDIGLVA NDAFVPLLFE 240
  241 LILSDGLSEQ VRGAAAGCVL AMVSKRMDPQ SKLPLLQTLQ ISRVFGLVSG DVDSDLVSKV 300
  301 SALLTGYAVE VLECHKRLNS EDTKAVSMDL LNEVLPSVFY VMQKCEVDST FSIVQFLLGY 360
  361 VSTLKGLPAL KEKQLLHITQ ILEVIRIQIC YDPMYRNNLN SLDKTGLEEE DRMSEFRKDL 420
  421 FVLLRTVGRV APEVTQHFIR NSLANAVESS SESNVEEVEA ALSLLYSFGE SMTEEAMKTG 480
  481 SGCLSELIPM LLTTQFPGHS HRLVALVYLE NITRYMKFIQ ENSQYIPNVL GAFLDDRGLH 540
  541 HQNFYVSRRA GYLFMRVVKL LKSKLVPFID KILQNLQDTL SQLTTMNFAS RELTGTEDGS 600
  601 HIFEAIGIII GLEDVPAEKQ SDYLSLLLTP LCQQIEAGLV QAKVASSEDF PVKIANIQFA 660
  661 IVAINALSKG FNERLVTASR PGIGLMFKQT LDVLLRVLIE FPKVEPLRSK VTSFIHRMVD 720
  721 TLGSAVFPYL PKALEQLLAD SEPKEMVGFM VLLNQLICKF NSALHDILEE VYPVVAVRIF 780
  781 NVIPRDGLPS RPGAVTEEMR ELIELQRMLY TFLHVIATHD LSSVFLTPKS RAYLDPMMQL 840
  841 VLNTSCNHKD ITVRKACVQI FIKLIKDWCA EPYSEEKVPG FQNFVIEAFA TNCCLYSVLD 900
  901 KSFNFSDANT HALFGEIITA QKVMYEKFGN TFLMHLMSKS FPSAHIPQDL AEQYCQKLQG 960
  961 NDIRSLKSYY QSLIENLRLQ QNGSHVFR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..916] PSI-BLAST 92.154902 Karyopherin beta2
    2 View Details [917..988] PSI-BLAST 29.522879 Proteolytic fragment of CRM1 spanning six C-terminal HEAT repeats


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle