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Protein Overview: htp-2

General Information:
Name(s) found: htp-2 / CE37734 [WormBase]
Description(s) found:
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  • WBGene00002033 locus:htp-2 status:Partially_confirmed UniProt:Q95XC8 protein_id:CCD74149.1 [WormBase]
  • gi|71999525|ref|NP_500981.3| Him-Three Paralog family member (htp-2) [Caenorhabditis elegans] [NCBI NR]
  • gi|54607220|gb|AAN63423.2| Him-three paralog protein 2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Him-three paralog protein 2 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE37734 WBGene00002033 locus:htp-2 status:Partially_confirmed TR:Q95XC8 protein_id:AAN63423.2 [wormpep150.fasta]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • 37734 WBGene00002033 locus:htp-2 status:Partially_confirmed TR:Q95XC8 protein_id:AAN63423.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37734 WBGene00002033 locus:htp-2 status:Partially_confirmed UniProt:Q95XC8_CAEEL protein_id:AAN63423.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37734 WBGene00002033 locus:htp-2 status:Partially_confirmed UniProt:Q95XC8_CAEEL protein_id:AAN63423.2| [wormORF-contam.fasta]
  • Him-Three Paralog family member (htp-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37734 WBGene00002033 locus:htp-2 status:Partially_confirmed UniProt:Q95XC8 protein_id:AAN63423.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE37734 WBGene00002033 locus:htp-2 status:Partially_confirmed UniProt:Q95XC8 protein_id:CCD74149.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Him-Three Paralog OS=Caenorhabditis elegans GN=htp-2 PE=1 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mitosis [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLENNYNE SLNKSKDAID DKTWSKLFPS IVSDPDRSSN FMIRAIYVVF SAVLRQRNIL  60
   61 EKEYFSKNYI TENLSCMTLS FKNLRAHQIA QLLRAAGDAT KDGFLKEISL VVTEHDGDVE 120
  121 AIEVFSMKFI YFENGGVVAR LSTDNNDQED PHFAELAQLR YEGAESVRDQ MVTIVRSVQF 180
  181 LCTKVLEPLP AEFTANFRLK YTNDAPSNFR IDGFDDSSTF YTLPDGIQSV TIGHLRPGHH 240
  241 AAHMQCWSKS MSDSYAAELT LKGHLDKVSD MYAFNPVNVL YKSFNSEDTD PGLSQDTTES 300
  301 ANDQGGNVTS PVDNITDSLE KTQMSPIKMR PTTRRGADDS KTRSSPYSRS RK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] PSI-BLAST 48.09691 The Mad2 spindle checkpoint protein possesses two distinct natively folded states
    2 View Details [255..352] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.656741006489351 bayes_pls_golite062009
  • protein binding
    		•  0.160528696920916 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle