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Protein Overview: TIF4A_ARATH

General Information:
Name(s) found: TIF4A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75140935|sp|Q7XA73.1|TIF4A_ARATH RecName: Full=Protein TIFY 4A; AltName: Full=Protein PEAPOD 1 [NCBI NR]
  • gi|33589740|gb|AAQ22636.1| At4g14710/dl3395c [Arabidopsis thaliana] [NCBI NR]
  • gi|30682959|ref|NP_567442.2| PPD1 (PEAPOD 1); dioxygenase/ metal ion binding [Arabidopsis thaliana] [NCBI NR]
  • Protein TIFY 4A OS=Arabidopsis thaliana GN=TIFY4A PE=1 SV=1 [Swiss-Prot]
  • At4g14710/dl3395c [Arabidopsis thaliana]gi|30682959|ref|NP_567442.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: TIFY4A, PPD1 | PPD1 (PEAPOD 1) | chr4:8427079-8429520 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g14710/dl3395c [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PPD1, TIFY4A | TIFY domain/Divergent CCT motif family protein | chr4:8427084-8429525 REVERSE LENGTH=313 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 313 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: leaf development [IMP]
    regulation of cell proliferation [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVGVSPAKS ILAKPLKLLT EEDISQLTRE DCRKFLKDKG MRRPSWNKSQ AIQQVLSLKA  60
   61 LYEPGDDSGA GIFRKILVSQ PVNPPRVTTT LIEPSNELEA CGRVSYPEDN GACHRMDSPR 120
  121 SAEFSGGSGH FVSEKDGHKT TISPRSPAET SELVGQMTIF YSGKVNVYDG IPPEKARSIM 180
  181 HFAANPIDLP ENGIFASSRM ISKLISKEKM MELPQKGLEK ANSSRDSGME GQANRKVSLQ 240
  241 RYREKRKDRK FSKAKKCPGV ASSSLEMFLN CQPRMKAAYS QNLGCTGSPL HSQSPESQTK 300
  301 SPNLSVDLNS EGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] deduced N/A No confident structure predictions are available.
    2 View Details [153..313] MSA 50.173996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle