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Protein Overview: CG13937-PG, CG13...

General Information:
Name(s) found: CG13937-PG / FBpp0289941 [FlyBase]
CG13937-PF / FBpp0289940 [FlyBase]
Description(s) found:
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  • gi|33589310|gb|AAQ22422.1| RH40165p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13937 (CG13937, FBgn0035287). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:1876551..1883037. It has the cytological map location 62B7-62B9. Based on sequence similarity, it is predicted to have molecular function</span>: HNK-1 sulfotransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: carbohydrate biosynthetic process. 2 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • RH40165p [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=FlyBase:FBpp0 [fly-100309-contam.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=FlyBase:FBpp0 [fly-100309-contam.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13937, isoform F OS=Drosophila melanogaster GN=CG13937 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=REFSEQ:NP_728689,GB_protein:AAN11504,FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(1876688..1876781,1876848..1877185,1877291..1877446,1877518..1877662,1877761..1877827,1877892..1878039,1878356..1878559,1881129..1881272); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=REFSEQ:NP_728688,GB_protein:AAN11503,FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG,FlyMine:FBpp0289941,modMine:FBpp0289941; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=REFSEQ:NP_728689,GB_protein:AAN11504,FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=REFSEQ:NP_728688,GB_protein:AAN11503,FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG,FlyMine:FBpp0289941,modMine:FBpp0289941; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=REFSEQ:NP_728689,GB_protein:AAN11504,FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=REFSEQ:NP_728688,GB_protein:AAN11503,FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG,FlyMine:FBpp0289941,modMine:FBpp0289941; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • RH40165p OS=Drosophila melanogaster GN=CG13937 PE=2 SV=2 [DROME.fasta.20160308]
  • FBpp0289940 type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=REFSEQ:NP_728689,GB_protein:AAN11504,FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0289941 type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=REFSEQ:NP_728688,GB_protein:AAN11503,FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG,FlyMine:FBpp0289941,modMine:FBpp0289941; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289940; name=CG13937-PF; parent=FBgn0035287,FBtr0300716; dbxref=REFSEQ:NP_728689,GB_protein:AAN11504,FlyBase:FBpp0289940,FlyBase_Annotation_IDs:CG13937-PF,UniProt/TrEMBL:Q8IRG5; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(1881129..1881272,1878356..1878559,1877892..1878039,1877761..1877827,1877518..1877662,1877291..1877446,1876848..1877185,1876688..1876781)); ID=FBpp0289941; name=CG13937-PG; parent=FBgn0035287,FBtr0300717; dbxref=REFSEQ:NP_728688,GB_protein:AAN11503,FlyBase:FBpp0289941,FlyBase_Annotation_IDs:CG13937-PG,UniProt/TrEMBL:Q8IRG5,FlyMine:FBpp0289941,modMine:FBpp0289941; MD5=624d4efc94d231019a5376cf80320258; length=431; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 431 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: carbohydrate biosynthetic process [IEA]
    Molecular Function: HNK-1 sulfotransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSKSLANC RAIRRYLLIF TAVSLLLLPL SLAYLVWNEQ LQKIRGFEAF NVQQQSPQQP  60
   61 QPQQQQQEQQ QQPQQHGQFP YPVVRYPVLL LNKNKNKDLT VVATGKTKNK WRYVDKDSNQ 120
  121 TLLPLIPEHA VQTLTPQEML QVEQRMDQRR ERLKDKCSAY GLDVLGHDAW HTPNTWEFLV 180
  181 NKKYHIIWCN VFKAASSSWM FNFNVLAGYS PSYLRKTKKI LLNLARERYP RVTLDELREA 240
  241 QNYSVTFIIA RDPFERLLSA YRDKMVFALP YSFHDKLGRS IVRNYRKKPS LAARAANTKF 300
  301 PSFPEFVHWL LDQVKRGSFI DMHFVAATSF CTPCLIRFDM ILKFESLAED QLYLIEKTGL 360
  361 KRVIAPVWRN MGKGRKTHEL QQQFYAQLTR QEMLELYEYY KYDFELFDYD IQEYLQVARP 420
  421 DEAESPAGTK N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle