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Protein Overview: gi|13622981, gi|...

General Information:
Name(s) found: gi|15675759 [NCBI NR]
gi|13622981 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|15675759|ref|NP_269933.1| DNA polymerase III PolC [Streptococcus pyogenes M1 GAS] [NCBI NR]
  • gi|13622981|gb|AAK34654.1| DNA polymerase III (alpha subunit) [Streptococcus pyogenes M1 GAS] [NCBI NR]
    • Organism: Streptococcus pyogenes M1 GAS
    Length: 1465 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLFAKLMD QIEMPLDMRR SSAFSSADII EVKVHSVSRL WEFHFAFAAV LPIATYRELH  60
   61 DRLIRTFEAA DIKVTFDIQA AQVDYSDDLL QAYYQEAFEH APCNSASFKS SFSKLKVTYE 120
  121 DDKLIIAAPG FVNNDHFRNN HLPNLVKQLE AFGFGILTID MVSDQEMTEH LTKNFVSSRQ 180
  181 ALVKKAVQDN LEAQKSLEAM MPPVEEATPA PKFDYKERAA KRQAGFEKAT ITPMIEIETE 240
  241 ENRIVFEGMV FDVERKTTRT GRHIINFKMT DYTSSFALQK WAKDDEELRK FDMIAKGAWL 300
  301 RVQGNIETNP FTKSLTMNVQ QVKEIVRHER KDLMPEGQKR VELHAHTNMS TMDALPTVES 360
  361 LIDTAAKWGH KAIAITDHAN VQSFPHGYHR ARKAGIKAIF GLEANIVEDK VPISYEPVDM 420
  421 DLHEATYVVF DVETTGLSAM NNDLIQIAAS KMFKGNIVEQ FDEFIDPGHP LSAFTTELTG 480
  481 ITDKHLQGAK PLVTVLKAFQ DFCKDSILVA HNASFDVGFM NANYERHDLP KITQPVIDTL 540
  541 EFARNLYPEY KRHGLGPLTK RFQVSLDHHH MANYDAEATG RLLFIFLKDA REKHGIKNLL 600
  601 QLNTDLVAED SYKKARIKHA TIYVQNQVGL KNMFKLVSLS NIKYFEGVPR IPRTVLDAHR 660
  661 EGLLLGTACS DGEVFDAVLT KGIDAAVDLA RYYDFIEIMP PAIYQPLVVR ELIKDQAGIE 720
  721 QVIRDLIEVG KRAKKPVLAT GNVHYLEPEE EIYREIIVRS LGQGAMINRT IGRGEGAQPA 780
  781 PLPKAHFRTT NEMLDEFAFL GKDLAYQVVV QNTQDFADRI EEVEVVKGDL YTPYIDKAEE 840
  841 TVAELTYQKA FEIYGNPLPD IIDLRIEKEL TSILGNGFAV IYLASQMLVN RSNERGYLVG 900
  901 SRGSVGSSFV ATMIGITEVN PMPPHYVCPS CQHSEFITDG SVGSGYDLPN KPCPKCGTPY 960
  961 QKDGQDIPFE TFLGFDGDKV PDIDLNFSGD DQPSAHLDVR DIFGDEYAFR AGTVGTVAEK1020
 1021 TAYGFVKGYE RDYGKFYRDA EVDRLAAGAA GVKRTTGQHP GGIVVIPNYM DVYDFTPVQY1080
 1081 PADDVTASWQ TTHFNFHDID ENVLKLDILG HDDPTMIRKL QDLSGIDPIT IPADDPGVMA1140
 1141 LFSGTEVLGV TPEQIGTPTG MLGIPEFGTN FVRGMVNETH PTTFAELLQL SGLSHGTDVW1200
 1201 LGNAQDLIKE GIATLKTVIG CRDDIMVYLM HAGLEPKMAF TIMERVRKGL WLKISEEERN1260
 1261 GYIDAMRENN VPDWYIESCG KIKYMFPKAH AAAYVLMALR VAYFKVHHPI MYYCAYFSIR1320
 1321 AKAFELKTMS GGLDAVKARM EDITIKRKNN EATNVENDLF TTLEIVNEML ERGFKFGKLD1380
 1381 LYKSDAIEFQ IKGDTLIPPF IALEGLGENV AKQIVKARQE GEFLSKMELR KRGGASSTLV1440
 1441 EKMDEMGILG NMPEDNQLSL FDDFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..367] PSI-BLAST 8.522879 Botulinum neurotoxin
    2 View Details [368..413] FFAS03 2.01 Hypothetical protein YcdX
    3 View Details [414..531] PSI-BLAST 13.0 No description for 2p1jA was found.
    4 View Details [532..1465] PSI-BLAST 1000.0 No description for 2hnhA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring phosphorus-containing groups
    		•  1.74384449514357 bayes_pls_golite062009
  • transferase activity
    		•  1.70261163116511 bayes_pls_golite062009
  • binding
    		•  1.16824006369362 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.063915676531347 bayes_pls_golite062009
  • protein binding
    		•  0.0610567034718369 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle