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Protein Overview: gi|15610059

General Information:
Name(s) found: gi|15610059 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • ref|NP_217438.1| smc [Mycobacterium tuberculosis H37Rv] [NCBI NR]
    • Organism: Mycobacterium tuberculosis H37Rv
    Length: 1289 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGSRFPLV DPLPSVGARP DRLRGQPRRR TRAGGRPGSA RCVPEAAAAA AGRHDTGPRR  60
   61 QSRRRLVAVD GADHRVQRAV IWPLVYLKSL TLKGFKSFAA PTTLRFEPGI TAVVGPNGSG 120
  121 KSNVVDALAW VMGEQGAKTL RGGKMEDVIF AGTSSRAPLG RAEVTVSIDN SDNALPIEYT 180
  181 EVSITRRMFR DGASEYEING SSCRLMDVQE LLSDSGIGRE MHVIVGQGKL EEILQSRPED 240
  241 RRAFIEEAAG VLKHRKRKEK ALRKLDTMAA NLARLTDLTT ELRRQLKPLG RQAEAAQRAA 300
  301 AIQADLRDAR LRLAADDLVS RRAEREAVFQ AEAAMRREHD EAAARLAVAS EELAAHESAV 360
  361 AELSTRAESI QHTWFGLSAL AERVDATVRI ASERAHHLDI EPVAVSDTDP RKPEELEAEA 420
  421 QQVAVAEQQL LAELDAARAR LDAARAELAD RERRAAEADR AHLAAVREEA DRREGLARLA 480
  481 GQVETMRARV ESIDESVARL SERIEDAAMR AQQTRAEFET VQGRIGELDQ GEVGLDEHHE 540
  541 RTVAALRLAD ERVAELQSAE RAAERQVASL RARIDALAVG LQRKDGAAWL AHNRSGAGLF 600
  601 GSIAQLVKVR SGYEAALAAA LGPAADALAV DGLTAAGSAV SALKQADGGR AVLVLSDWPA 660
  661 PQAPQSASGE MLPSGAQWAL DLVESPPQLV GAMIAMLSGV AVVNDLTEAM GLVEIRPELR 720
  721 AVTVDGDLVG AGWVSGGSDR KLSTLEVTSE IDKARSELAA AEALAAQLNA ALAGALTEQS 780
  781 ARQDAAEQAL AALNESDTAI SAMYEQLGRL GQEARAAEEE WNRLLQQRTE QEAVRTQTLD 840
  841 DVIQLETQLR KAQETQRVQV AQPIDRQAIS AAADRARGVE VEARLAVRTA EERANAVRGR 900
  901 ADSLRRAAAA EREARVRAQQ ARAARLHAAA VAAAVADCGR LLAGRLHRAV DGASQLRDAS 960
  961 AAQRQQRLAA MAAVRDEVNT LSARVGELTD SLHRDELANA QAALRIEQLE QMVLEQFGMA1020
 1021 PADLITEYGP HVALPPTELE MAEFEQARER GEQVIAPAPM PFDRVTQERR AKRAERALAE1080
 1081 LGRVNPLALE EFAALEERYN FLSTQLEDVK AARKDLLGVV ADVDARILQV FNDAFVDVER1140
 1141 EFRGVFTALF PGGEGRLRLT EPDDMLTTGI EVEARPPGKK ITRLSLLSGG EKALTAVAML1200
 1201 VAIFRARPSP FYIMDEVEAA LDDVNLRRLL SLFEQLREQS QIIIITHQKP TMEVADALYG1260
 1261 VTMQNDGITA VISQRMRGQQ VDQLVTNSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..261] PSI-BLAST 42.0 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.
    3 View Details [262..588] FFAS03 3.2 Tropomyosin
    4 View Details [589..775] FFAS03 4.9 Smc hinge domain
    5 View Details [776..1020] deduced N/A No confident structure predictions are available.
    6 View Details [1021..1127] deduced N/A No confident structure predictions are available.
    7 View Details [1128..1289] PSI-BLAST 20.154902 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.225375777463061 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle