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Protein Overview: RF1_PSEAE

General Information:
Name(s) found: RF1_PSEAE [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Peptide chain release factor 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=prfA PE=3 SV=2 [Swiss-Prot]
    • Organism: Pseudomonas aeruginosa PAO1
    Length: 360 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASLLKKLD VLSDRYEELT ALLGDAEVIS DQTRFRAYSR EYAEVEPVIL AFRDYRKVQA  60
   61 DLEGAQALLK DSDPELRDLA EEEVAEARGR LAALGDSLQR MLLPKDPNDS RNVFLEIRAG 120
  121 TGGDEAAIFS GDLFRMYSRY AERQGWRIET LSENEGEHGG YKEVIARVEG DNVYAKLKFE 180
  181 SGAHRVQRVP ETESQGRIHT SACTVAVLPE PDEQAAIEIN PADLRVDTYR SSGAGGQHVN 240
  241 KTDSAVRITH IPSGIVVECQ EERSQHKNRA KAMAWLAAKL NDQQQAAAQQ AIASTRKLLV 300
  301 GSGDRSERIR TYNFPQGRVT DHRINLTLYS LGEVMEGAVE QVIEPLLQEY QADQLAALGD 360
  361

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 122.0 Molecular basis for bacterial class 1 release factor methylation by PrmC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation release factor activity
    		•  8.49824253851587 bayes_pls_golite062009
  • translation termination factor activity
    		•  8.4944923601206 bayes_pls_golite062009
  • translation regulator activity
    		•  5.08132283479856 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  5.06589285641735 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.35723700591238 bayes_pls_golite062009
  • binding
    		•  3.84101343221316 bayes_pls_golite062009
  • translation release factor activity, codon specific
    		•  0.183484956864194 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle