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Protein Overview: gi|9946688, gi|1...

General Information:
Name(s) found: gi|9946688 [NCBI NR]
gi|15595993 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|9946688|gb|AAG04185.1|AE004515_1 carboxyphosphonoenolpyruvate phosphonomutase [Pseudomonas aeruginosa PAO1] [NCBI NR]
  • gi|15595993|ref|NP_249487.1| 2-methylisocitrate lyase [Pseudomonas aeruginosa PAO1] [NCBI NR]
    • Organism: Pseudomonas aeruginosa PAO1
    Length: 298 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTSLTPGQ RFREAVATEH PLQVVGTINA NHALLAKRAG FKAIYLSGGG VAAGSLGLPD  60
   61 LGISGLDDVL TDVRRITDVC DLPLLVDVDT GFGSSAFNVA RTVKSMIKFG AAAMHIEDQV 120
  121 GAKRCGHRPN KEIVSQQEMV DRIKAAVDAR SDDSFVIMAR TDALAVEGLQ AAIDRACACV 180
  181 EAGADMIFPE AMTELAMYKE FAAAVKVPVL ANITEFGATP LFTTDELASA DVSLVLYPLS 240
  241 AFRAMNKAAE NVYTAIRRDG TQKNVIDTMQ TRMELYDRID YHSFEQKLDA LFAQKKNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..298] PSI-BLAST 83.522879 Crystal Structure of Pyruvate and Mg2+ bound 2-methylisocitrate lyase (PrpB) from Salmonella typhimurium

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.96882793316847 bayes_pls_golite062009
  • methylisocitrate lyase activity
    		•  2.09739770469711 bayes_pls_golite062009
  • citrate (pro-3S)-lyase activity
    		•  0.86095690814621 bayes_pls_golite062009
  • lyase activity
    		•  0.70986506551964 bayes_pls_golite062009
  • transferase activity
    		•  0.5687068385416 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.404868472347919 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.36217387205482 bayes_pls_golite062009
  • carboxyvinyl-carboxyphosphonate phosphorylmutase activity
    		•  0.2132734143313 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle