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Protein Overview: gi|49612792, gi|...

General Information:
Name(s) found: gi|50122266 [NCBI NR]
gi|49612792 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|50122266|ref|YP_051433.1| hypothetical protein ECA3344 [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49612792|emb|CAG76242.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKRTYAMRY VAGQPAERIF PPGEMHYPGQ ALPTGSLLLE GDVLRVMVWN IFKQQRLNWL  60
   61 SVLQNFGKGT QLVLLQEAQS TPDLIRFATT NYLSADQVPA IILPQHPSGV MTLSAAQPVY 120
  121 CCPLREREPL LRLAKSSLVT VYALQNGQRL MVINIHAVNF SFGVEIYTKQ LAAIGEQLLH 180
  181 HQGPAIMAGD FNAWSQQRIN ALNRFAARMG LQEVHFVDDQ RRKAFGRPLD FVFYRDMTVN 240
  241 QSSVLVTQAS DHNPLLVEFS LI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] PSI-BLAST 40.69897 DNA repair endonuclease Hap1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.23505510330573 bayes_pls_golite062009
  • hydrolase activity
    		•  0.79070010643157 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.71596812518333 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle