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Protein Overview: gi|50120289, gi|...

General Information:
Name(s) found: gi|50120289 [NCBI NR]
gi|49610815 [NCBI NR]
Description(s) found:
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  • gi|50120289|ref|YP_049456.1| putative hydrolase-oxidase [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49610815|emb|CAG74260.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • hypothetical protein ECA1350 [Erwinia carotovora subsp. atroseptica SCRI1043]gi|49610815|emb|CAG74260.1| conserved hypothetical protein [Erwinia carotovora subsp. atroseptica SCRI1043] [nrdb_11152004_Chlamydomonas]
  • conserved hypothetical protein [Erwinia carotovora subsp. atroseptica SCRI1043] [nr-271106-contam.fasta]
  • hypothetical protein ECA1350 [Erwinia carotovora subsp. atroseptica SCRI1043] [nr-271106-contam.fasta]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNTELERVI NEKLSTETFQ DYAPNGLQVE GRAEVKRIVT GVTASQALLD AAVEKQADAI  60
   61 LVHHGYFWKN EPQIVCGMKR NRLKTLLLND INLYGYHLPL DAHPELGNNA QLAALLEIQV 120
  121 QGMIEPLMPY GELAQPMTAE AFCRRVEKRL GRTVLHCGDN APQQIQRVAW CTGGGQGFIE 180
  181 QAARFGVDAF ITGEVSEQTI HIAREMGLHF FAAGHHATER GGIRALGEWL AAQHGFDVTF 240
  241 IDIPNPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 89.522879 Structural genomics, protein ybgI, unknown function


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle