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Protein Overview: gi|30264396, gi|...

General Information:
Name(s) found: gi|30264396 [NCBI NR]
gi|30259054 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30264396|ref|NP_846773.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259054|gb|AAP28259.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 772 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: establishment of competence for transformation [ISSLink to PubMed article]
    Molecular Function: competence pheromone activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGQWGYVAI SFIIGIAIAF SSSVVLLTCC LGLYVFFCLY RTSRKTFLYC MIVCFSGAMY  60
   61 TTYVQGQNKP LGESYEATRG VIYNTPLING DRLSFQVEDQ NKNIVQLSYK MKSASEKKQM 120
  121 RQLHAGVSCI FDGERKEPQI ARNFHGFNYR DYLYKQNIHF ILEATYISEC RKTSLSLVQW 180
  181 ILLLRQQAIL GVTEMFPEQS GAFMNALLFG DRQQMTFEVE GQYQQFGLVH LLAISGSHIV 240
  241 LLMVIVYFIL LRSGVTREIA TVCLIFFIPI YMILAGASPS VIRASITGVL MLIAFMCSIR 300
  301 LSSLDALSIT AICMLIFDPY LVFNIGFQFS FVGSFALLLS APLLLESGNG VIRNSIYISL 360
  361 ISQLVSTPIL LYHFGYYSPY SIFLNILYVP FLSLIVLPCS IIILICLPII PFLAKSFANV 420
  421 LSIGLNLSND FLSYCESLPF TRLNFGQTPI LLVALYCVSI ISVLMVWERR ISKGMVFIFA 480
  481 GIFLFISTGH YVYPYFRESG SVTFLDVGQG DAILIRLPYD QEIYLIDTGG TIRLNKEEWQ 540
  541 RKKHEFSVGN DVLIPYLQKE GIKKIDKLIV THGDADHIGA AQELLSNITV KEVVFGRKEQ 600
  601 EAILEKAVKK QALEKEVKIS EVGEGESWRV NEAEFFVLAP TGKERSENNA SIVLWAKLGG 660
  661 ITWLFTGDLE EGEKGLVATY PDLRADVLKV AHHGSNTSSI TPFLSAVQPN IAIISVGERN 720
  721 RYGHPHKEGI ERFEKMAIEI WRTDKQGAIS YVFKEERGTF RSKITYDETR NR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] deduced N/A No confident structure predictions are available.
    2 View Details [165..354] MSA 1.394977 View MSA. No confident structure predictions are available.
    3 View Details [355..503] MSA 2.387996 View MSA. No confident structure predictions are available.
    4 View Details [504..772] PSI-BLAST 26.39794 X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.590913389028346 bayes_pls_golite062009
  • catalytic activity
    		•  0.398796871066338 bayes_pls_golite062009
  • protein binding
    		•  0.233736652147815 bayes_pls_golite062009
  • RNA binding
    		•  0.165539790635644 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0778913972787759 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle