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Protein Overview: gi|30263916, gi|...

General Information:
Name(s) found: gi|30263916 [NCBI NR]
gi|30258560 [NCBI NR]
Description(s) found:
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  • gi|30263916|ref|NP_846293.1| UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258560|gb|AAP27779.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase [Bacillus anthracis str. Ames] [NCBI NR]
  • UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase [Bacillus anthracis str. Sterne]gi|47529346|ref|YP_020695.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase [Bacillus anthracis str. 'Ames Ancestor']gi|30263916|ref|NP_84 [nrdb_11152004_Chlamydomonas]
  • UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: acid-amino acid ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHTLVSCL HDFPVVPKEN PEITSIEADS RKVKEGSLFV CMKGYTVDSH DFAKQAAAQG  60
   61 AAAIVAERPI DVDVPVVLVK NTFRSLAVLA DYFYGQPTHK LHLIGITGTN GKTTTSHIMD 120
  121 EIMRAHGHKT GLIGTINMKI GDETFEVKNT TPDALTLQQT FAKMVEHGVD STVMEVSSHA 180
  181 LDLGRVHGCD YDVAVFTNLT QDHLDYHKTM EEYKHAKGLL FAQLGNSYNH NREKYAVLNN 240
  241 DDAVTVEYMR STAATVVTYG IDTTSDVMAK DIAMTSGGTT FTLVTPYESV NVTMKLIGKF 300
  301 NVYNVLAATA AGLVSGVSLE TIIDVIKELA GVPGRFEVVD GGQNYTVIVD YAHTPDSLEN 360
  361 VLKTAKQFAK GDVYCIVGCG GDRDRTKRPI MASVATQYAT HAIYTSDNPR SEDPAAILDD 420
  421 MVHGANGNNY EVIIDRKEAI HHAITKAKAD DIIIIAGKGH ETYQIIGKDV HHFDDREVAK 480
  481 EAITERLNNE E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..491] PSI-BLAST 82.0 UDP-N-acetylmuramyl tripeptide synthetase MurE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acid-amino acid ligase activity
    		•  4.86493054281191 bayes_pls_golite062009
  • catalytic activity
    		•  3.03081854683329 bayes_pls_golite062009
  • UDP-N-acetylmuramate-L-alanine ligase activity
    		•  2.62956763198067 bayes_pls_golite062009
  • UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
    		•  2.38541436302257 bayes_pls_golite062009
  • ligase activity
    		•  2.2556848409907 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  2.19206014001612 bayes_pls_golite062009
  • UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
    		•  1.471039191151 bayes_pls_golite062009
  • UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
    		•  1.15437935952018 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle