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Protein Overview: gi|39998149, gi|...

General Information:
Name(s) found: gi|39998149 [NCBI NR]
gi|39985095 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39998149|ref|NP_954100.1| ferredoxin--NADP(+) reductase subunit alpha [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39985095|gb|AAR36450.1| dihydroorotate dehydrogenase, electron transfer subunit, putative [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyrimidine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: dihydroorotate oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDVISNEVL APNLHQLVVR APRIASSRLP GQFVIVRAEA GEERIPLTIG DADAAAGTIT  60
   61 LFVQAIGAST QRIVAVPAGG RLRDVAGPLG LPTHIRNWGR VACIGGGVGT AVLFPLAKAL 120
  121 AEAGNEVTTI IGGRSARYII LADELGALSR ELLVTTEDGS LGVQGFVTQP LEGLVADPAR 180
  181 RPGAVFAVGP VPMMRAVAEL TRPHGIETVV SLNPIMIDGT GMCGGCRVLV GGEAKFACVD 240
  241 GPEFDGHLVD FDNLADRLAT YRESEASHVC RVAGKEVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 33.39794 Dihydroorotate dehydrogenase B, PyrK subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.82418089257266 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.06930052685144 bayes_pls_golite062009
  • dihydroorotate dehydrogenase activity
    		•  0.67910028759775 bayes_pls_golite062009
  • transferase activity
    		•  0.20565726169867 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle