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Protein Overview: gi|39997181, gi|...

General Information:
Name(s) found: gi|39997181 [NCBI NR]
gi|39984071 [NCBI NR]
Description(s) found:
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  • gi|39997181|ref|NP_953132.1| glucose-1-phosphate thymidylyltransferase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39984071|gb|AAR35459.1| glucose-1-phosphate thymidylyltransferase [Geobacter sulfurreducens PCA] [NCBI NR]
  • glucose-1-phosphate thymidylyltransferase [Geobacter sulfurreducens PCA]gi|39984071|gb|AAR35459.1| glucose-1-phosphate thymidylyltransferase [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • glucose-1-phosphate thymidylyltransferase [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipopolysaccharide biosynthetic process [ISSLink to PubMed article]
    dTDP-rhamnose biosynthetic process [ISSLink to PubMed article]
    Molecular Function: glucose-1-phosphate thymidylyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISKGIILA GGAGSRLYPL TLVASKQLQP VYDKPMIYYP LATLMMAGIK DILIISTPHD  60
   61 TPRFQALLGD GSRWGITLTY KVQPEPKGIA QAFLVGEEFI AGDPVCLILG DNIFYGKMGL 120
  121 DRLVQDFTTG AWIFGYYVND PERYGVVQFD GNGKAIGIEE KPAQPKSNYA VPGLYLYDGR 180
  181 VVDVARNLAP SPRGELEITD VNLDYLRRGE LMVERLGRGI AWLDTGTHQS LLEASHFIGT 240
  241 LEARQGLKIA CLEEIALRMG FIDCRRMAEV IAETPKSSYR DYLARIYNET ELCGGVVHER 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 79.0 RmlA (RfbA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uridylyltransferase activity
    		•  3.74072767898515 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.70047942699289 bayes_pls_golite062009
  • UTP:glucose-1-phosphate uridylyltransferase activity
    		•  2.65167602524122 bayes_pls_golite062009
  • UTP-monosaccharide-1-phosphate uridylyltransferase activity
    		•  2.46432078102948 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.33861720107822 bayes_pls_golite062009
  • transferase activity
    		•  2.17535315350752 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  1.33788133706753 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.17054423506287 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  1.10309252319727 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.02084820914491 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.983416157001861 bayes_pls_golite062009
  • mannosyltransferase activity
    		•  0.91123217364068 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.513376694534047 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.2363835251362 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.0539392112504681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.60

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle