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Protein Overview: gi|39982288, gi|...

General Information:
Name(s) found: gi|39995525 [NCBI NR]
gi|39982288 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995525|ref|NP_951476.1| flagellar hook assembly protein FlgD [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982288|gb|AAR33749.1| flagellar hook assembly protein FlgD [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: bacterial-type flagellum hook [ISSLink to PubMed article]
    Biological Process: flagellum assembly [ISSLink to PubMed article]
    ciliary or flagellar motility [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYGVTNDTA AAAAAMKKST GMNKDDFLKL FVTQLQNQDP LNPQDSTEFI GQLAQLTQVE  60
   61 QAYNTNSNLS NLLNLVNGAT SLSAVSFIGK EITASGDLIK LTSGTQPTLG YRLPATAQKV 120
  121 TIKIMDDTDT VVRTLTLGGT QAGDGSITWD GKDEKGNALP DGRYTFSVTG TNAEGKDFDG 180
  181 APLLLGRAEG VMLEGEEPYI TIGGINVPLG NILSVKGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] Pfam 13.21467 No description for PF03963.5 was found. No confident structure predictions are available.
    2 View Details [117..218] PSI-BLAST 8.39794 Structure of C5a peptidase- a key virulence factor from Streptococcus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle