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Protein Overview: gi|39995140, gi|...

General Information:
Name(s) found: gi|39995140 [NCBI NR]
gi|39981902 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995140|ref|NP_951091.1| carbon-nitrogen family hydrolase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39981902|gb|AAR33364.1| hydrolase, carbon-nitrogen family [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 259 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [ISSLink to PubMed article]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTVKAGAV QFTVRLGDID ANVAYVQKAL RRLASQGCRL AVLPEMWSTG YAYKELNELA  60
   61 KRTPEVVAEL GRLSRELEMV IVGSMPEPHG EKVFNTAYVL DRGELLGSYR KIHLFSLMGE 120
  121 DRSLDGGDRW LVVDTHVGRL GVFICYDLRF PELARRLAVE GAEIIVVPAE WPKPREEHWR 180
  181 ALLRARAIEN QLFVVAANCC GVQGKLDFFG SSLIIDPKGE LLAEGGYDPC EPMATLDFQV 240
  241 METWRDQIPC FADRRPSCY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 60.221849 hypothetical protein yl85

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.35962310800332 bayes_pls_golite062009
  • N-carbamoylputrescine amidase activity
    		•  0.749539597459006 bayes_pls_golite062009
  • hydrolase activity
    		•  0.06604196264626 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle