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Protein Overview: gi|24115609, gi|...

General Information:
Name(s) found: gi|24115609 [NCBI NR]
gi|24054946 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24115609|ref|NP_710119.1| putative activating enzyme [Shigella flexneri 2a str. 301] [NCBI NR]
  • gi|24054946|gb|AAN45826.1| putative activating enzyme [Shigella flexneri 2a str. 301] [NCBI NR]
    • Organism: Shigella flexneri 2a str. 301
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSRCALVSK IIPFSCVDGP GSRLALFLQG CNLRCKNCHN PWTMGRCNDC GECVPQCPHQ  60
   61 ALQIVDGKVV WNAVVCEQCD TCLKMCPQHA TPMAQSMSVD EVLSHVRKAV LFIEGITVSG 120
  121 GEATTQLPFV VALFTAIKND PQLRHLTCLV DSNGMLSETG WEKLLPVCDG AMLDLKAWGS 180
  181 ECHQQLTGRD NQQIKRSIYL LAERGKLAEL RLLMIPGQVD YLQHIEELAA FIKGLGDVPV 240
  241 RLNAFHAHGV YGEAQSWASA TPEDVEPLAD ALKVRGVSRL IFPALYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] FFAS03 2.52 Ferredoxin
    2 View Details [97..287] PSI-BLAST 21.39794 No description for 2fb2A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  1.75938320394291 bayes_pls_golite062009
  • electron carrier activity
    		•  1.37623238398153 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  1.07237794141661 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  0.890500444803156 bayes_pls_golite062009
  • catalytic activity
    		•  0.851778834263757 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  0.596786713233954 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  0.59064478180058 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.305357798033586 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle