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Protein Overview: DAPD_COXBU

General Information:
Name(s) found: DAPD_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=dapD PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lysine biosynthetic process via diaminopimelate [ISSLink to PubMed article]
    Molecular Function: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLKTIIEE AYQNKDNFTT DTVPKKIHQA IHQTIELLDN GELRIAEKQN GQWNTNEWAK  60
   61 MAILLYFKTE PLKTFDAGYT FFYDKIPLKY TNNTSQPQSG VRVVPHAIVR KGAYLAPNTV 120
  121 LMPSYINIGA YVDSGTLIDT WATVGSCAQI GKNVHLSGGA GIGGVLEPLQ AHPTIIEDDC 180
  181 FIGARSEIVE GVMVEKGSVI SMGVFVGQST PIYNRQTQEI TYGRIPAGSV VIPGSLPSKD 240
  241 GHYNRYSAII VKQVDKKTRS KVSLNELLRE G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 53.30103 Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.22811944286398 bayes_pls_golite062009
  • O-acyltransferase activity
    		•  1.64247384742412 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  1.61334532879528 bayes_pls_golite062009
  • acyltransferase activity
    		•  1.61097318205269 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.61041958820284 bayes_pls_golite062009
  • transferase activity
    		•  1.1230560089123 bayes_pls_golite062009
  • O-acetyltransferase activity
    		•  0.289124788848623 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle