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Protein Overview: gi|24350861, gi|...

General Information:
Name(s) found: gi|24375888 [NCBI NR]
gi|24350861 [NCBI NR]
Description(s) found:
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  • gi|24375888|ref|NP_719931.1| virulence regulator BipA [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350861|gb|AAN57375.1|AE015874_2 virulence regulator BipA [Shewanella oneidensis MR-1] [NCBI NR]
  • virulence regulator BipA [Shewanella oneidensis MR-1]gi|24350861|gb|AAN57375.1| virulence regulator BipA [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • virulence regulator BipA [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 603 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pathogenesis [ISSLink to PubMed article]
    Molecular Function: GTP binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLENLRNIAI IAHVDHGKTT LVDKLLSQSG TLATRGEATE RVMDSNDLEK ERGITILAKN  60
   61 TAIKWNDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTKKAFAQG 120
  121 LKPIVVINKI DRPGARPDWV IDQVFDLFDN LGATDEQLDF PIVYASALNG FATLDPDVVS 180
  181 EDMTPLFQTI VEKVSSPDAD ADGPFQMQIS QLDYNSYVGV IGVGRINRGS IKTNQQVSVI 240
  241 GADGKVRNGK MGQVLGYMGL ERTEVDVANA GDIVAITGLG ELKISDTVCA AGNVEAMPPL 300
  301 SVDEPTLTMT FQVNTSPFAG KEGKYVTSRN ILERLQQELV HNVALRVEET DSPDRFAVSG 360
  361 RGELHLSILI ENMRREGYEL AVSRPEVILK TIDGELCEPF ETLTVDVEEE HQGTVIEKLG 420
  421 IRKAEMKDMQ LDGKGRVRVD FVIPSRGLIG FQTEFLTATS GTGLIYHSFD HYGPHKGGDI 480
  481 GQRANGVLIS NATGKALTFA LFGLQDRGRL FIGHAAEVYE GQVVGIHARS NDLTVNCLKG 540
  541 KQLTNMRASG TDEAQVLTTP ITLTLEQALE FIDDDELVEV TPKSIRVRKK HLTENDRKRA 600
  601 SRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..495] PSI-BLAST 91.0 Elongation factor G (EF-G), domain II; Elongation factor G (EF-G), N-terminal (G) domain; Elongation factor G (EF-G), domain IV; Elongation factor G (EF-G)
    2 View Details [496..603] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle