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Protein Overview: gi|24375675, gi|...

General Information:
Name(s) found: gi|24375675 [NCBI NR]
gi|24350597 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24375675|ref|NP_719718.1| putative manganese-dependent inorganic pyrophosphatase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350597|gb|AAN57162.1|AE015851_3 inorganic pyrophosphatase, manganese-dependent [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phosphorus metabolic process [ISSLink to PubMed article]
    Molecular Function: inorganic diphosphatase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMYVVGHKI PDSDSICGAI ALAYLKNQIG EEAVAARLGE LSPETAFILE RFGFEAPEYK  60
   61 TSYAGEQVYI VDHSELTQAP DDIAKATIVG IVDHHKLGDL TTDTPLECWI RPVGCSNTVI 120
  121 KMMYDFYQVA IPKNIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAEIA GIEDYKALGM 180
  181 EMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDAIKA ELEADIKALK 240
  241 VEGNRHSVLL LLTDIMKEGS ELLVVSDDAE LINRAYGKTP VDGKVWLDGV LSRKKQVVPQ 300
  301 LQAAFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 80.0 Structure of Streptococcus gordonii inorganic pyrophosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.78154379547895 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.30887439158217 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85363015434459 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  0.648027091973004 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  0.610962701958695 bayes_pls_golite062009
  • exonuclease activity
    		•  0.596639519476561 bayes_pls_golite062009
  • binding
    		•  0.585481144055308 bayes_pls_golite062009
  • nuclease activity
    		•  0.463328502877406 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  0.448568186952831 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.436324225363531 bayes_pls_golite062009
  • single-stranded DNA specific exodeoxyribonuclease activity
    		•  0.285695976555125 bayes_pls_golite062009
  • protein binding
    		•  0.0455855311641946 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle