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Protein Overview: gi|24350520, gi|...

General Information:
Name(s) found: gi|24375619 [NCBI NR]
gi|24350520 [NCBI NR]
Description(s) found:
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  • gi|24375619|ref|NP_719662.1| uridine phosphorylase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350520|gb|AAN57106.1|AE015844_8 uridine phosphorylase [Shewanella oneidensis MR-1] [NCBI NR]
  • uridine phosphorylase [Shewanella oneidensis MR-1]gi|24350520|gb|AAN57106.1| uridine phosphorylase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • uridine phosphorylase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [ISSLink to PubMed article]
    Molecular Function: uridine phosphorylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVFHLGLT KAMLDGATLA IVPGDPERVK RIAELMDNAT FLASHREYTS YLAYADGKPV  60
   61 VICSTGIGGP STSIAVEELA QLGVNTFLRV GTTGAIQPHV NVGDVIVTQA SVRLDGASLH 120
  121 FAPMEFPAVA NFECTTAMVA ACRDAGVEPH IGVTASSDTF YPGQERYDTV TGRVTRRFAG 180
  181 SMKEWQDMGV LNYEMESATL FTMCATQGWR AACVAGVIVN RTQQEIPDEA TMKKTEVSAV 240
  241 SIVVAAAKKL LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 56.69897 Uridine phosphorylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • purine-nucleoside phosphorylase activity
    		•  3.68206997938506 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  3.66765825367784 bayes_pls_golite062009
  • catalytic activity
    		•  2.18268586151113 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.01261001022129 bayes_pls_golite062009
  • S-methyl-5-thioadenosine phosphorylase activity
    		•  1.6959166270803 bayes_pls_golite062009
  • transferase activity
    		•  1.42022417161912 bayes_pls_golite062009
  • nucleobase binding
    		•  1.33291775180025 bayes_pls_golite062009
  • nucleoside binding
    		•  1.11256863177576 bayes_pls_golite062009
  • purine binding
    		•  1.00226077276304 bayes_pls_golite062009
  • binding
    		•  0.192121943858605 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle