YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24375521, gi|...

General Information:
Name(s) found: gi|24375521 [NCBI NR]
gi|24350394 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375521|ref|NP_719564.1| ATP-dependent RNA helicase DeaD [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350394|gb|AAN57008.1|AE015835_4 ATP-dependent RNA helicase DeaD [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 623 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cold acclimation [ISSLink to PubMed article]
    Molecular Function: ATP-dependent helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDERTFRE LGLSENLLRA LDELGYEKPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF  60
   61 ALPLLNKVTS QTTPQILVLA PTRELAVQVA EAFSSYAKFM KNFHVLPIYG GQSMQQQLNA 120
  121 LKRGPQVIVG TPGRVMDHMR RGTLKLETLQ ALVLDEADEM LKMGFIDDIE WILEHTPPQR 180
  181 QLALFSATMP EQIKRVANKH LKNATNISIA ASHTTVDSIE QRFVQVSQHN KLEALVRVLE 240
  241 VENTEGIIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVEQL KNGKLDILIA 300
  301 TDVAARGLDV ERIGHVVNYD IPYDTEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE 360
  361 RATNSRISPM KVPSPETVAE RRLSRLGEQL AQTMNNDLEF MREAVAQLCQ QLEVDTDLLA 420
  421 AALLHQVQQE RPLQLPAIQE RVRDERSERS ERGSDRGAER GERRSRESRP MPASLGSAEA 480
  481 LKDNPDLKMC RYVIDVGREN GVGVGNIVGA IANEANIDSR YIGAIQLYDS VTTVDLPDGM 540
  541 PKDVLQHLKK VRVCGKPLNI REAGDQVFVD SGRGARSDRR PRSDRPAGDR KPRAASGDKP 600
  601 FADRKPRSDK PAGERRPRKP REE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] PSI-BLAST 74.0 No description for 2hxyA was found.
    2 View Details [100..623] PSI-BLAST 13.154902 No description for 2ibmA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle