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Protein Overview: gi|24349988, gi|...

General Information:
Name(s) found: gi|24375203 [NCBI NR]
gi|24349988 [NCBI NR]
Description(s) found:
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  • gi|24375203|ref|NP_719246.1| NupC family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349988|gb|AAN56690.1|AE015804_12 NupC family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • NupC family protein [Shewanella oneidensis MR-1]gi|24349988|gb|AAN56690.1| NupC family protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • NupC family protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleoside transport [ISSLink to PubMed article]
    Molecular Function: nucleoside transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQILVSLLGI ITLLAVAYLA SENRRAINYR TVGLAFLLQL ALGAFVMYSA LGQSMIFSMA  60
   61 AAVSNVISYS NDGMSFMFGG LVSDKMYELF GAGGFVIAFK VLPIIVFFSA LSAVLYYLGI 120
  121 MQLVVKAVGG ALQKLLNTSK AESMSASANI FLGVTEAPLL IKPYMPRMTR SELFAVMCGG 180
  181 LASIAGTMLA GYAQLGIKME YLLAASFMAA PGGLLFAKLL IPQTETINDA HLQLTEENQP 240
  241 RNLLDAATTG TMSGLSLALA VGAMLFSFIS LVALFNGMLG GIGAWFGLEG LTLQQILGYL 300
  301 FAPLAWLMGI SWNEAMLAGS FIGQKIVINE FFAYINLAPY LSGDALVATT GQPMSERTQV 360
  361 ILSFALCGFA NIGTVAIAIA GIGGLVPERR AEIASLGLKA LAAGILSNLM AATIAGLFMS 420
  421 LS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] Pfam 32.69897 No description for PF01773.11 was found. No confident structure predictions are available.
    2 View Details [89..265] Pfam 16.958607 No description for PF07670.5 was found. No confident structure predictions are available.
    3 View Details [266..422] MSA 3.103968 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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