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Protein Overview: gi|24375037, gi|...

General Information:
Name(s) found: gi|24375037 [NCBI NR]
gi|24349780 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375037|ref|NP_719080.1| riboflavin biosynthesis protein RibF [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349780|gb|AAN56524.1|AE015789_11 riboflavin biosynthesis protein RibF [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: FAD biosynthetic process [ISSLink to PubMed article]
    FMN biosynthetic process [ISSLink to PubMed article]
    riboflavin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: riboflavin kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELIRGIHNI LSSHHGCVLT IGNFDGVHRG HAQVIANLVQ KAKQLSLPPT VMTFEPQPQE  60
   61 LFRGENAPAR LSLLRDKIVL LDELGVERLV CVNFNRAFAD QPAEHFIEEL LVRKLGIKYL 120
  121 VVGDDFCFGK GRKGDFDMLK QAGTRYGFTV VSTQSFIVGS QRVSSTAVRE QLAKGNLEQA 180
  181 RRLLGHPFTL SGRVAHGQKI GRTIGFPTAN IALKRNVVPV RGVFAVKLYW EDSDIYEGVA 240
  241 NIGFRPTVNG QICQLEVHLL DFEGDIYGKH VEVELVAKLR DEQPFDSLDA LKQQILNDAN 300
  301 EARALFGNDA G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 64.69897 Crystal structure of a flavin binding protein from Thermotoga Maritima, TM379


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle