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Protein Overview: gi|24349751, gi|...

General Information:
Name(s) found: gi|24375013 [NCBI NR]
gi|24349751 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375013|ref|NP_719056.1| beta-hexosaminidase b precursor [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349751|gb|AAN56500.1|AE015787_6 beta-hexosaminidase b precursor [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 896 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan turnover [ISSLink to PubMed article]
    Molecular Function: beta-N-acetylhexosaminidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTIAATAI LFALGLSACS QGPKTVNTPA PSSAEQPTPA LLTQAQLQQF GDNLGVTYRV  60
   61 LTNRPDDNCD KAAAEGRCFV AEIDFVPEVD LIGKEWAIYF SQMRPVQSVE GKEFSITHIK 120
  121 GDLYRIAPTE AFSGFSKGVK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVKQ 180
  181 DPETRMEVRP YVEPFTDMVK QYSRTDADKL APATASQLFS NNQNVSEDAS LAVNTIIPTP 240
  241 KTVVLHSNDK VVSLSSGIKL DVASVSSPSA EKQSFKTDQV AAALERLARL GVKESEQGLV 300
  301 MKLSWRQGAE GSYLLDIKPD GIKIAAGDAA GFSYALSSLT SLIDVQDLRV NAMTIEDSPR 360
  361 YPFRGMHIDV ARNFHSKAMI FALIDQMAAY KLNKLHLHMA DDEGWRLEID GLPELTDIGS 420
  421 KRCHDLEENT CLLPQLGSGP FAESSVNGFY SKQDYIDILK YANARQIQVI PSMDMPGHSR 480
  481 AAIKSMEARY RKLLAQGKPT EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYQFVDK 540
  541 VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPECLSFV ANNDKGVKSI EDLGAYFIER 600
  601 ISNQLAEKGI EAAGWSDGMS HVRPSYMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS 660
  661 NPEVLYFDFP YEADPKEHGY YWASRATNAH KVFSFMPDNL VANAEQWTDL QNLPFEADDR 720
  721 ARTDEKGKKS GPREQGKNFA GLQGQLWSET IRSNDTVEYM IFPRLLMLAE RAWHQAEWEV 780
  781 PYQYQGALYN QSTGHFTAAM RDAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAKIQ 840
  841 GGKLFANVAY PGLKMEFRQA NGQWQAYQAG QAVTAPVEIR AIAADGIRKG RSLIVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..896] PSI-BLAST 1000.0 BACTERIAL CHITOBIASE, GLYCOSYL HYDROLASE FAMILY 20

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • beta-N-acetylhexosaminidase activity
    		•  7.18312657765525 bayes_pls_golite062009
  • hexosaminidase activity
    		•  4.78304165611462 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  4.11319792356479 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.92012282533754 bayes_pls_golite062009
  • hydrolase activity
    		•  3.00246423046472 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • chitinase activity
    		•  0.8156800179481 bayes_pls_golite062009
  • amylase activity
    		•  0.748967897302847 bayes_pls_golite062009
  • pattern binding
    		•  0.530930429677881 bayes_pls_golite062009
  • glucosidase activity
    		•  0.528679164808812 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.4998423581103 bayes_pls_golite062009
  • receptor binding
    		•  0.367373698683903 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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