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Protein Overview: gi|24374974, gi|...

General Information:
Name(s) found: gi|24374974 [NCBI NR]
gi|24349700 [NCBI NR]
Description(s) found:
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  • gi|24374974|ref|NP_719017.1| riboflavin synthase subunit alpha [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349700|gb|AAN56461.1|AE015783_4 riboflavin synthase, alpha subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • riboflavin synthase, alpha subunit [Shewanella oneidensis MR-1]gi|24349700|gb|AAN56461.1| riboflavin synthase, alpha subunit [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • riboflavin synthase, alpha subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • riboflavin synthase subunit alpha [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: riboflavin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: riboflavin synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTGIIEAVG TLRKLERKGD DIRLTVASGK LDLTDVRLGD SIATNGVCLT VVQQLADGYV  60
   61 ADVSAETVSL TGFANYKVGT KVNLEKAVTP TTRLGGHMVS GHVDGIATVE QRLARGQAIE 120
  121 FWLAAPTELA RYIAHKGSIT IDGVSLTVNE VDGHRFRLTI VPHTAGETTL VDLKAGDKVN 180
  181 IEVDLIARYL ERLMRFDSKE TQGGGVTMEM LARAGFVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 71.221849 Riboflavin synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • riboflavin synthase activity
    		•  5.11500941509376 bayes_pls_golite062009
  • catalytic activity
    		•  2.05427820269334 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • binding
    		•  0.534066059984103 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle