YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24374924, gi|...

General Information:
Name(s) found: gi|24374924 [NCBI NR]
gi|24349633 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|24374924|ref|NP_718967.1| homoserine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349633|gb|AAN56411.1|AE015777_6 homoserine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • homoserine kinase [Shewanella oneidensis MR-1]gi|24349633|gb|AAN56411.1| homoserine kinase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • homoserine kinase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: threonine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: homoserine kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTVYAPAS MGNVGVGFDL LGAALAPIDG SLLGDRVTIA AADGGVSLTQ VGGWAHKLPS  60
   61 NPEDNIVHQC AVFFLKALGK ENRGVALTLE KNLPVGSGLG SSASSVVAAL YALNEHFGCP 120
  121 YDKQALLELM GEFEGKISGS VHYDNVAPCY LGGMQLMLNV PGAICEAIPS FKQWYWVVAY 180
  181 PGISLSTAMM RKLMPEQYDK SVVIDFGRYL SAFVHASYQQ NAQLAIQVLK DVLAEPYRAA 240
  241 AIPGYDNARA ALAELGMLTT GISGSGPTLF SVTDDLATAN AAKAWLEANY LTDAGGFAHV 300
  301 CRLDEQGTRR VD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] PSI-BLAST 39.522879 Homoserine kinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • homoserine kinase activity
    		•  2.13523123963453 bayes_pls_golite062009
  • catalytic activity
    		•  1.20658247466773 bayes_pls_golite062009
  • amino acid kinase activity
    		•  0.292543190343241 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle