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Protein Overview: gi|24374871, gi|...

General Information:
Name(s) found: gi|24374871 [NCBI NR]
gi|24349569 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374871|ref|NP_718914.1| ISSod5, transposase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349569|gb|AAN56358.1|AE015773_3 ISSod5, transposase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transposition, DNA-mediated [ISSLink to PubMed article]
    Molecular Function: transposase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPTFDINA AIQALREGKD LTGKDGILTP LIKQLTEAAL AAELDGHLAS TEGANRKNGK  60
   61 TTKTVKSPLG NFELNTPRDR AGTFEPQLVK KHQTQLTDEM ERKIIGLFSL GSSYQDIRAH 120
  121 IEDMYGMSVS NGTVNAITDK LLPELQAWRE RELEPLYPVI WLDAIHYKIK ENGRFISKAV 180
  181 YTILALNVDG KKELLGLYLS DNEGAHHWLS VLTDLYNRGV KDILIACVDG LKGFPEAIAT 240
  241 IYPQTEVQLC VIHQIRNSMK YVASKHQKAF MADLKCVYKA ATLNAAEMAL DELETKWGDK 300
  301 YPVVIKSWRN KWALLSVYFK YPDYVRTAIY TTNAVEAVHR QFRKLTKTKG GFANENSLLK 360
  361 LLYAGILKAS ERWTHPIQNW NLTLSQLSIH FEGRLENHID L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 31.618991 View MSA. No confident structure predictions are available.
    2 View Details [189..401] MSA 58.623996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle