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Protein Overview: gi|24374747, gi|...

General Information:
Name(s) found: gi|24374747 [NCBI NR]
gi|24349411 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374747|ref|NP_718790.1| flagellar hook-associated protein FliD [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349411|gb|AAN56234.1|AE015761_4 flagellar hook-associated protein FliD [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 456 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ciliary or flagellar motility [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISATGMGS GLDISNIVKV LVDAEKAPKE AMFNKTEDSI KAKVSAMGTL KSALSTFQDA  60
   61 VKKLQTGDAL NQRKISVSTD AYLSAKAEKT AQAGSYGIKV EQVATNHKIA GTNVADATQP 120
  121 VGEGSLAFGV NGKSFSVDIA ATDSLAEIAK KVNEASDNVG VTATVITSDA GSRLVFSANK 180
  181 TGEDNQISLT ATNTSGSGVT DMFGSGNTST LQDAKNAVLY IDGQKVTSQS NEVKNAITGV 240
  241 TLNLTNADVA KTTTVKIEQD NEAVKTNVQA FVDAYNSLVT TIDKMSSYDK DKKTAAALQG 300
  301 DSMIRSIESQ LRSVASGRVP TADGGSIALY DIGIKADRYG KLSVDDTKLN KALTEDMSSV 360
  361 EALFATPDKG LANRFNDLAN SYVKSSGLIA DRQSSYTTQQ SRLADQRAAF TLKMDQLTAR 420
  421 LTKQFNAMDL VVGKLNQQSS GLVDRLNSLP GAVKKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] Pfam 33.055517 No description for PF02465.9 was found. Confident ab initio structure predictions are available.
    2 View Details [112..202] Pfam 7.69897 No description for PF07196.4 was found. Confident ab initio structure predictions are available.
    3 View Details [203..368] MSA 1.199973 View MSA. No confident structure predictions are available.
    4 View Details [369..456] MSA 4.174996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle