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Protein Overview: gi|24349096, gi|...

General Information:
Name(s) found: gi|24374511 [NCBI NR]
gi|24349096 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374511|ref|NP_718554.1| prophage LambdaSo, replication protein O [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349096|gb|AAN55998.1|AE015736_14 prophage LambdaSo, replication protein O [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: viral genome replication [ISSLink to PubMed article]
    Molecular Function: DNA replication origin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRPVAEHK QQTRGGVVKA DLEDGYLRLS NTLVDALCRT KLSDRESRVV FAVIRRTYGY  60
   61 GKATDWVCLE QLADMTGITT SNICHAIKSL TARDIIIKDG RKVGVNQIVS AWQDKKSHSI 120
  121 NGKKSTVKTD NIIVNSDNAI VETDSVDCQN REIQKKDNIT KDTIQKISSS HIADAMADMQ 180
  181 VKPDAAVQTP NGKLWGTQDD LKCAEYIFNK VLIVNPTAKQ PNWPDWANQV RLMRMQDNRS 240
  241 HHDICKLFKF ANSDSFWASN VLCPKTLRKQ WDKLNAKLLA RSSHEANTPT ATANTARYEH 300
  301 STARVFRELR EMAEQLQHSA DHLGGGNTID ADYEPVQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] MSA 18.064997 View MSA. No confident structure predictions are available.
    2 View Details [167..338] MSA 4.052983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle