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Protein Overview: PDXH_SHEON

General Information:
Name(s) found: PDXH_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24374424|ref|NP_718467.1| pyridoxamine 5'-phosphate oxidase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348995|gb|AAN55911.1|AE015727_11 pyridoxamine 5'-phosphate oxidase [Shewanella oneidensis MR-1] [NCBI NR]
  • Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Shewanella oneidensis (strain MR-1) GN=pdxH PE=3 SV=1 [Swiss-Prot]
  • pyridoxamine 5'-phosphate oxidase [Shewanella oneidensis MR-1]gi|24348995|gb|AAN55911.1| pyridoxamine 5'-phosphate oxidase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • pyridoxamine 5'-phosphate oxidase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 212 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridoxine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: pyridoxamine-phosphate oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLSDIRRE YTQGGLRRAD LPKNPMQLFE LWMTQARDAQ LSDPTAMCVA TVDEHGQPFQ  60
   61 RIVLLKRFDD SGFVFFTNLG SRKALQIAAN NKVSLHFPWH PIERQVSILG EAQPLSTAEV 120
  121 LKYFMTRPKE SQIAAWVSQQ SSKLSARQVL EGKFFEMKAK FAKGDVPLPS FWGGYLVKPS 180
  181 SIEFWQGGEH RLHDRFLYTR EAQAWQIDRL AP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 83.69897 Pyridoxine 5'-phoshate oxidase (PNP oxidase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pyridoxamine-phosphate oxidase activity
    		•  3.81533880638523 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.18444956617957 bayes_pls_golite062009
  • catalytic activity
    		•  0.660906721832294 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.0268904833845668 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle