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Protein Overview: BIOB_SHEON

General Information:
Name(s) found: BIOB_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Biotin synthase OS=Shewanella oneidensis (strain MR-1) GN=bioB PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biotin biosynthetic process [ISS]
    Molecular Function: biotin synthase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLQVRHDW KREEIEALFA LPMNDLLFKA HSIHREEYDP NEVQISRLLS IKTGACPEDC  60
   61 KYCPQSARYD TGLEKERLLA METVLTEARS AKAAGASRFC MGAAWRNPKD KDMPYLKQMV 120
  121 QEVKALGMET CMTLGMLSAE QANELAEAGL DYYNHNLDTS PEYYGDVITT RTYQNRLDTL 180
  181 SHVRASGMKV CSGGIVGMGE KATDRAGLLQ QLANLPQHPD SVPINMLVKV AGTPFEKLDD 240
  241 LDPLEFVRTI AVARILMPLS RVRLSAGREN MSDELQAMCF FAGANSIFYG CKLLTTPNPE 300
  301 ESDDMGLFRR LGLRPEQGAA ASIDDEQAVL AKAAAYQDKA SAQFYDAAAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 79.221849 The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • biotin synthase activity
    		•  4.96431653338581 bayes_pls_golite062009
  • radical SAM enzyme activity
    		•  4.81217611621334 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  3.43375708969779 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  2.79703059227143 bayes_pls_golite062009
  • coproporphyrinogen oxidase activity
    		•  1.98937742831419 bayes_pls_golite062009
  • catalytic activity
    		•  1.48331922124015 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  1.37188743230327 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  1.18901545014659 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.593156857804038 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle