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Protein Overview: PYRD_SHEON

General Information:
Name(s) found: PYRD_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24374135|ref|NP_718178.1| dihydroorotate dehydrogenase 2 [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348631|gb|AAN55622.1|AE015700_6 dihydroorotate dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
  • Dihydroorotate dehydrogenase (quinone) OS=Shewanella oneidensis (strain MR-1) GN=pyrD PE=3 SV=1 [Swiss-Prot]
  • dihydroorotate dehydrogenase [Shewanella oneidensis MR-1]gi|24348631|gb|AAN55622.1| dihydroorotate dehydrogenase [Shewanella oneidensis MR-1]gi|30173290|sp|Q8EDZ8|PYRD_SHEON Dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DH [nrdb_11152004_Chlamydomonas]
  • dihydroorotate dehydrogenase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 339 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyrimidine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: dihydroorotate oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYKIAQKVM FQMDPERAHN LAIGSLRMTG NGPLNAFYAQ NITPAPVSFM GLTFPNPVGL  60
   61 AAGMDKDGES IDAFHAMGFG HVEVGTVTPR PQPGNDLPRL FRLKPAKAII NRMGFNNKGV 120
  121 DNLVKNLIAK KTDIMVGVNI GKNKDTPVEQ GKDDYLICMD KVYLHAAYIA VNISSPNTPG 180
  181 LRSLQYGDLL DELLSAIKAK QLELADKHKK YVPIALKIAP DLTIEEIENI AQALIKNQFD 240
  241 GAIATNTTLT RDGVSGLANA NESGGLSGKP LTELSTKVIK QLATCLQGQI PIIGVGGINS 300
  301 AEDALAKFDA GATMVQIYSG FIYQGPKLIK EIVEAYRLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..339] PSI-BLAST 69.39794 Dihydroorotate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • dihydroorotate dehydrogenase activity
    		•  2.96830698317456 bayes_pls_golite062009
  • dihydroorotate oxidase activity
    		•  2.43908593807774 bayes_pls_golite062009
  • catalytic activity
    		•  2.31793084876503 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.59709503080261 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  1.01963656484845 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle