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Protein Overview: gi|24373991, gi|...

General Information:
Name(s) found: gi|24373991 [NCBI NR]
gi|24348445 [NCBI NR]
Description(s) found:
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  • gi|24373991|ref|NP_718034.1| phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348445|gb|AAN55478.1|AE015685_7 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative [Shewanella oneidensis MR-1]gi|24348445|gb|AAN55478.1| phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: thiamin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: thiamin-phosphate diphosphorylase activity [ISSLink to PubMed article]
    phosphomethylpyrimidine kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTPTKHFNH LVPKPIVWTI AGSDSGGGAG IQADLATIND LGGHGCSVIT TLTAQSSVAV  60
   61 DLVEPVSEAM LLTQLSTLLA DLPPQAIKIG LLADQQQLQL LADWLANFKT HYPHVPVILD 120
  121 PVMVASCGDE LGNRSTPLDF SRFKGLISLI TPNVKELARL TSFTDAQTIP SKMTKADFAA 180
  181 AAIQLAEQLG CSVLAKGGDN RFDPHLAEDL LVCHDVAGCS ELDSHGHFWL VSDRIDTVHN 240
  241 HGSGCTLSSA IASVLAFGFV LHDAIVVAKA YVNQGLTHAR GLGHGPGPLA RTTWPHSLLQ 300
  301 YPKIVAVCAD KQPQPYAFKR LTTDLGVYPV VNNLLLLEQL LAAGVKTIQL RVKSDAGITA 360
  361 AELEAQIQTA IALGKHYDAQ LFINDHWQLA IKHGAFGVHL GQEDLAMADL NAIHGAGLAL 420
  421 GISSHSYFEL LRAHQHAPSY IALGHIFPTT TKQMPSAPQG LFKLAHYVEL LKAYYPLVAI 480
  481 GGIGPSNLDQ VNATGVRNIA VVRAITEADD PIAALAELTR AWEQGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 52.522879 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
    2 View Details [113..286] PSI-BLAST 10.0 Crystal structure of aminoimidazole riboside kinase from Salmonella enterica
    3 View Details [287..526] PSI-BLAST 32.69897 Thiamin phosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • thiamin-phosphate diphosphorylase activity
    		•  6.04450222340788 bayes_pls_golite062009
  • catalytic activity
    		•  2.31352397210218 bayes_pls_golite062009
  • phosphomethylpyrimidine kinase activity
    		•  2.16632642989285 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.16976945211093 bayes_pls_golite062009
  • transferase activity
    		•  1.16478613213801 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  0.63318404518052 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle