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Protein Overview: SYS_SHEON

General Information:
Name(s) found: SYS_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24373862|ref|NP_717905.1| seryl-tRNA synthetase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348273|gb|AAN55349.1|AE015672_5 seryl-tRNA synthetase [Shewanella oneidensis MR-1] [NCBI NR]
  • Serine--tRNA ligase OS=Shewanella oneidensis (strain MR-1) GN=serS PE=3 SV=1 [Swiss-Prot]
  • seryl-tRNA synthetase [Shewanella oneidensis MR-1]gi|24348273|gb|AAN55349.1| seryl-tRNA synthetase [Shewanella oneidensis MR-1]gi|30173158|sp|Q8EEQ9|SYS_SHEON Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [nrdb_11152004_Chlamydomonas]
  • seryl-tRNA synthetase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: seryl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: serine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDPKFLRNE LAVTAERLAT RGFILDVAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ  60
   61 AKARGEDVDA IMAQVGDLGA QLDAKKVELA AVLEEVNAIA MSMPNLPDES APIGADETEN 120
  121 VEVRRWGSPR SFDFPIKDHI DLGEGLNGLD FKSAVKITGS RFIVMKGQIA RLNRALGQFM 180
  181 LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL 240
  241 TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEL VQLVKPEDSM 300
  301 AALEVLTGHA ETVLQRLGLP YRTVVLCTGD MGFGSSKTYD IEVWLPGQNT YREISSCSNM 360
  361 KDFQARRMQA RYRVKADNKP VLLHTLNGSG LAVGRTLVAI LENYQNADGS VTVPEALRPY 420
  421 MGGLTQIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..428] PSI-BLAST 107.0 No description for 2dq3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle