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Protein Overview: gi|24347791, gi|...

General Information:
Name(s) found: gi|24373491 [NCBI NR]
gi|24347791 [NCBI NR]
Description(s) found:
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  • gi|24373491|ref|NP_717534.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347791|gb|AAN54978.1|AE015636_2 succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1]gi|24347791|gb|AAN54978.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane succinate dehydrogenase complex [ISSLink to PubMed article]
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: electron carrier activity [ISSLink to PubMed article]
    succinate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSEQNVKK QRPVHLDLQT IRFPATAIVS ILHRVSGVIM LFAVGILIWL LNSSLASAES  60
   61 FAGVQSLFDN FVVKFIMWGI LTALTFHLFG GLRHLVMDTG RWEELASGTA SAKAVFVLTV 120
  121 AFSILAGLWV W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 29.522879 Succinate dehydrogenase subunit SdhC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • succinate dehydrogenase activity
    		•  10.6133558935785 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  7.24661342841192 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.99989196344185 bayes_pls_golite062009
  • electron carrier activity
    		•  4.50772505551128 bayes_pls_golite062009
  • binding
    		•  1.1076219212629 bayes_pls_golite062009
  • catalytic activity
    		•  0.971825536251904 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle