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Protein Overview: gi|24347744, gi|...

General Information:
Name(s) found: gi|24373456 [NCBI NR]
gi|24347744 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373456|ref|NP_717499.1| 3-oxoadipate CoA-succinyl transferase, beta subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347744|gb|AAN54943.1|AE015632_9 3-oxoadipate CoA-succinyl transferase, beta subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [ISSLink to PubMed article]
    Molecular Function: CoA-transferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSREQLAQ RVAKELQDGY YVNLGIGIPT LVANYIPEGM EVMLQSENGL LGMGEFPTEE  60
   61 TIDPDLINAG KQTVTAVKGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVN GSIASWMIPG 120
  121 KLIKGMGGAM DLVAGAENII VTMMHADKYG NSKLLPVCEL PLTGYGCIKR VVTDLAFIEI 180
  181 KDGAFHLLER APGVSVEEIV SKTAGKLIVP DHVPEMVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 66.221849 Succinate:CoA transferase, N-terminal domain; Succinate:CoA transferase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-oxoacid CoA-transferase activity
    		•  2.22792536321983 bayes_pls_golite062009
  • catalytic activity
    		•  1.68776709414398 bayes_pls_golite062009
  • CoA-transferase activity
    		•  0.50782945985068 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  0.18413827683017 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle