YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PYRH_SHEON

General Information:
Name(s) found: PYRH_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • Uridylate kinase OS=Shewanella oneidensis (strain MR-1) GN=pyrH PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleobase, nucleoside and nucleotide interconversion [ISSLink to PubMed article]
    Molecular Function: uridylate kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNPKPAFR RILLKLSGEA LMGDEGFGID PKVLDRMAQE VKELVELGIQ VGVVIGGGNL  60
   61 FRGEGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYNWA 120
  121 EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VLKGTKVDGV YSDDPMKNPE 180
  181 AVKYDELTYT EVLDKELKVM DLAAFTMARD HDMPILVFNM NKPGALRRVV MGEEEGTMIK 240
  241 AK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] PSI-BLAST 58.09691 The structure of E. coli UMP kinase in complex with UMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • kinase activity
    		•  5.43826659128409 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  4.76215533422168 bayes_pls_golite062009
  • nucleotide kinase activity
    		•  4.36245911991838 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  4.17538459617947 bayes_pls_golite062009
  • uridylate kinase activity
    		•  3.54453921304057 bayes_pls_golite062009
  • catalytic activity
    		•  3.20382750184555 bayes_pls_golite062009
  • transferase activity
    		•  2.54481238004476 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.89315414622708 bayes_pls_golite062009
  • phosphotransferase activity, carboxyl group as acceptor
    		•  1.02979719559565 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle