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Protein Overview: TYRA_SHEON

General Information:
Name(s) found: TYRA_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • T-protein OS=Shewanella oneidensis (strain MR-1) GN=tyrA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tyrosine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: chorismate mutase activity [ISSLink to PubMed article]
    prephenate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKTTSELE HLRGLIDGVD QQLLHLLRKR LDLVAQVGTV KHAAGLPIYA PQREAAMLAK  60
   61 RREEAQTMGI APQLIEDILR RLMRESYLNE KDVGFKQVKN DLGSVVIVGG KGQLGGLFQQ 120
  121 MLRLSGYQVK VLDKDDWQQA ECLFADAGLV LVTVPIAITC DIIREKLTQL PRDCILADLT 180
  181 SIKTEPMQAM LAAHKGPVVG FHPMFGPDVG SLAKQVVVVC HGREADKYQW LLEQIAIWGA 240
  241 RIVEAEPECH DNAMQLVQAM RHFSTFVYGL NLCKEEADIE TLLKFSSPIY RLELAMVGRL 300
  301 FAQSPELYAD IIFAQQESQH AIGDYLDNYR EALELLKRGD REEFINQFQM VAKWFGDFAP 360
  361 QFQRESRMML QSVSDMKTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 19.30103 No description for 2d8dA was found.
    2 View Details [102..379] PSI-BLAST 68.522879 No description for 2pv7A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chorismate mutase activity
    		•  3.92706714868161 bayes_pls_golite062009
  • prephenate dehydratase activity
    		•  2.47223657985094 bayes_pls_golite062009
  • catalytic activity
    		•  1.46550169341481 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  2.16785883389468 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.95477050413 bayes_pls_golite062009
  • prephenate dehydrogenase activity
    		•  1.03016160419952 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.771153340292 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.66554302844944 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle