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Protein Overview: CARA_SHEON

General Information:
Name(s) found: CARA_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Carbamoyl-phosphate synthase small chain OS=Shewanella oneidensis (strain MR-1) GN=carA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyrimidine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT  60
   61 YPHIGNTGTN NEDVESNGVH ACGLIIRDLP LIASSFRNQQ NLSDYLKANN VVGIADIDTR 120
  121 KLTRILREKG AQAGCIMAGA DLDEVKALAA AKAFPGLKGM DLAKEVTTDK AYPWRKGSWR 180
  181 LVGGLPADTP AEALKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTPAS EVLAMNPDGV 240
  241 FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP 300
  301 VSNIEKGNVM ITSQNHGFAA DEATLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA 360
  361 SPGPNDAAPL FDHFIELIEH YRQNAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..386] PSI-BLAST 121.0 Carbamoyl phosphate synthetase, small subunit N-terminal domain; Carbamoyl phosphate synthetase, small subunit C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  11.6556846811261 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  11.614541080865 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  8.83104490344765 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  6.7523653122648 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  2.51214170411838 bayes_pls_golite062009
  • phosphoribosylformylglycinamidine synthase activity
    		•  1.51568729563523 bayes_pls_golite062009
  • ligase activity
    		•  1.45023593909062 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  1.35896725827905 bayes_pls_golite062009
  • catalytic activity
    		•  0.902495165806215 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
    		•  0.270391651600004 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.12569720972861 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.0769356405014503 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle