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Protein Overview: gi|24372655, gi|...

General Information:
Name(s) found: gi|24372655 [NCBI NR]
gi|24346698 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372655|ref|NP_716697.1| catalase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346698|gb|AAN54142.1|AE015551_6 catalase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to oxidative stress [ISSLink to PubMed article]
    Molecular Function: catalase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQYLTSQS GSPIADDQNS LSAGERGPLL LQDWHLIEKL AHFNRERIPE RVVHAKGTGV  60
   61 YGTFTLTKDL SDYTIADHFN GVGKQTETFV RFSTVGGEMG SADAERDPRG FGLRFYTARG 120
  121 NHDIVGNNTP TFFLRDGIKF PDFIHTQKRN PLTNLKDPQA MWDFWSLNPE AMHQVTILMS 180
  181 DRGIPANYRQ MHGYGSHTFS FWNAKGERFW VKFHFKSQQG VVNLSNEQAD KLKGIDPDSS 240
  241 QRDMVVAITD GNFPRWTVNV QIMPEADANT YHINPFDLTK VWPHGDYPLI EIGVLELNRL 300
  301 PQNYFAEVEQ VALAPSNLVP GVGASPDKML QARLFAYADA QRYRIGANYN QLPVNCPHAA 360
  361 KANHHQRAGA MAGTQCPYHG SQTGGDASAN YGPNSTIGAL VEPANFAEPP LRLDGETARY 420
  421 SRYNQDDYTQ AGNLYRIFSE EEKARLVATI SGSLRQASMD VQQRMLAHFQ KADADYGQRI 480
  481 KMALGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..486] PSI-BLAST 1000.0 The crystal structure of bovine liver catalase without NADPH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalase activity
    		•  8.51144125131094 bayes_pls_golite062009
  • peroxidase activity
    		•  6.21360523181668 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  6.21360523181668 bayes_pls_golite062009
  • antioxidant activity
    		•  6.04714571701065 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.53518604474275 bayes_pls_golite062009
  • catalytic activity
    		•  2.21594208202467 bayes_pls_golite062009
  • binding
    		•  1.7977175288758 bayes_pls_golite062009
  • protein binding
    		•  1.4378207235312 bayes_pls_golite062009
  • hydrolase activity
    		•  0.904643040470721 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle